Geneva report for 2636326
General information
Genbank ID: 2636326
Gene name:spsA
COGCOG0463
Current annotation:spore coat polysaccharide synthesis
BLOCKS information
BLOCKS hitsno blocks match
PRINTS information
PRINTS hitsno prints match
Pfam information (readme)
PFAM hits:Glycos_transf_2:
PFAM diagram
Variability information from nongapped BLAST
Variability profile(0-conserved,1-variable,red line - variable region)
Query anchored nongapped BLAST alignment (blue-aligned block, yellow-unaligned block with similar length,grey-unaligned gap-rich block readme)


Clustering on variable region (hierachical clustering,average percent identity between clusters < 30%)
On query region 126 to 256, total sequences extracted for clustering = 20
Cluster 1:
gid=29376684[102-252] [Enterococcus faecalis V583]
Cluster 2:
gid=21222205[99-257] [Streptomyces coelicolor A3(2)]
gid=23100380[108-258] [Oceanobacillus iheyensis HTE831]
Cluster 3:
gid=17230560[186-316] [Nostoc sp. PCC 7120]
Cluster 4:
gid=14521365[168-298] [Pyrococcus abyssi]
gid=14590308[164-294] [Pyrococcus horikoshii]
Cluster 5:
gid=21674094[123-217] [Chlorobium tepidum TLS]
Cluster 6:
gid=12006005[123-268] [Lactobacillus delbrueckii subsp. bulgaricus]
Cluster 7:
gid=15615929[126-233] [Bacillus halodurans]
Cluster 8:
gid=34580462[122-281] [Rickettsia sibirica]
gid=15604311[121-280] [Rickettsia prowazekii]
gid=15892546[122-281] [Rickettsia conorii]
Cluster 9:
gid=17940062[117-273] [Leptospira interrogans]
Cluster 10:
gid=15600193[118-294] [Pseudomonas aeruginosa PA01]
Cluster 11:
gid=29349689[111-277] [Bacteroides thetaiotaomicron VPI-5482]
Cluster 12:
gid=22999126[120-297] [Magnetococcus sp. MC-1]
Cluster 13:
gid=30019357[178-308] [Bacillus cereus ATCC 14579]
Cluster 14:
gid=18266405[128-265] [Escherichia coli]
Cluster 15:
gid=32265580[187-317] [Helicobacter hepaticus ATCC 51449]
Cluster 16:
gid=16080842[126-256] [Bacillus subtilis]
Short motifs reported by MEME(readme)
MEME motif diagram in this region
Motif alignments
Motif 1
 
Motif 2