Geneva report for 2633299 General information Genbank ID: 2633299 Gene name: yhdY COG COG0668 Current annotation: similar to hypothetical proteins BLOCKS information BLOCKS hits :IPB001880: BLOCKS diagram PRINTS information PRINTS hits no prints match Pfam information (readme) PFAM hits :MS_channel: PFAM diagram Variability information from nongapped BLAST Variability profile(0-conserved,1-variable,red line - variable region) Query anchored nongapped BLAST alignment (blue-aligned block, yellow-unaligned block with similar length,grey-unaligned gap-rich block readme) Clustering on variable region (hierachical clustering,average percent identity between clusters < 30%) On query region 1 to 132, total sequences extracted for clustering = 40 Cluster 1: gid=23029778[1-138] [Microbulbifer degradans 2-40] Cluster 2: gid=27367868[1-137] [Vibrio vulnificus CMCP6] gid=28901356[1-136] [Vibrio parahaemolyticus RIMD 2210633] Cluster 3: gid=32476337[1-93] [Pirellula sp.] Cluster 4: gid=15639808[1-104] [Treponema pallidum] Cluster 5: gid=16765007[1-118] [Salmonella typhimurium LT2] gid=24113185[1-115] [Shigella flexneri 2a str. 301] gid=16760224[1-118] [Salmonella enterica subsp. enterica serovar Typhi] gid=26247666[1-115] [Escherichia coli CFT073] Cluster 6: gid=29123010[1-129] [Streptomyces cinnamonensis] gid=21225287[1-123] [Streptomyces coelicolor A3(2)] gid=29833757[19-151] [Streptomyces avermitilis MA-4680] Cluster 7: gid=15606178[14-145] [Aquifex aeolicus] Cluster 8: gid=33240242[1-125] [Prochlorococcus marinus subsp. marinus str. CCMP1375] Cluster 9: gid=21242784[1-112] [Xanthomonas axonopodis pv. citri str. 306] gid=21231606[1-107] [Xanthomonas campestris pv. campestris str. ATCC 33913] Cluster 10: gid=17548735[1-130] [Ralstonia solanacearum] Cluster 11: gid=18309242[1-145] [Clostridium perfringens] Cluster 12: gid=33864341[1-130] [Prochlorococcus marinus str. MIT 9313] Cluster 13: gid=33865330[1-119] [Synechococcus sp. WH 8102] Cluster 14: gid=14590251[1-146] [Pyrococcus horikoshii] gid=18976784[1-143] [Pyrococcus furiosus DSM 3638] gid=14521824[1-157] [Pyrococcus abyssi] Cluster 15: gid=17158764[93-224] [Nostoc sp. PCC 7120] Cluster 16: gid=23125896[1-97] [Nostoc punctiforme] Cluster 17: gid=33861192[1-155] [Prochlorococcus marinus subsp. pastoris str. CCMP1378] Cluster 18: gid=16078029[1-132] [Bacillus subtilis] gid=15615246[8-139] [Bacillus halodurans] Cluster 19: gid=15669330[1-136] [Methanococcus jannaschii] Cluster 20: gid=32473118[83-214] [Pirellula sp.] Cluster 21: gid=4378179[1-154] [Zymomonas mobilis] Cluster 22: gid=20090576[1-119] [Methanosarcina acetivorans str. C2A] gid=21228739[1-122] [Methanosarcina mazei Goe1] Cluster 23: gid=33151830[1-97] [Haemophilus ducreyi 35000HP] Cluster 24: gid=26990075[1-164] [Pseudomonas putida KT2440] Cluster 25: gid=24213692[1-125] [Leptospira interrogans serovar lai str. 56601] Cluster 26: gid=15805247[1-140] [Deinococcus radiodurans] Cluster 27: gid=23055011[18-150] [Geobacter metallireducens] Cluster 28: gid=29654382[1-135] [Coxiella burnetii RSA 493] Cluster 29: gid=29350096[1-154] [Bacteroides thetaiotaomicron VPI-5482] Short motifs reported by MEME(readme) MEME motif diagram in this region Motif alignments Motif 1