Geneva report for 2314578
General information
Genbank ID: 2314578
Gene name:HP1406
COGCOG0502
Current annotation:biotin synthetase (bioB)
BLOCKS information
BLOCKS hits:IPB002684:
BLOCKS diagram
PRINTS information
PRINTS hitsno prints match
Pfam information (readme)
PFAM hits:Radical_SAM:
PFAM diagram
Variability information from nongapped BLAST
Variability profile(0-conserved,1-variable,red line - variable region)
Query anchored nongapped BLAST alignment (blue-aligned block, yellow-unaligned block with similar length,grey-unaligned gap-rich block readme)


Clustering on variable region (hierachical clustering,average percent identity between clusters < 30%)
On query region 182 to 282, total sequences extracted for clustering = 75
Cluster 1:
gid=3287741[240-341] [N/A]
gid=29654322[215-321] [Coxiella burnetii RSA 493]
gid=21241162[217-344] [Xanthomonas axonopodis pv. citri str. 306]
gid=15618952[213-331] [Chlamydophila pneumoniae CWL029]
gid=16759719[212-346] [Salmonella enterica subsp. enterica serovar Typhi]
gid=30250227[241-339] [Nitrosomonas europaea ATCC 19718]
gid=27366219[215-350] [Vibrio vulnificus CMCP6]
gid=27377206[227-331] [Bradyrhizobium japonicum]
gid=21672559[211-342] [Buchnera aphidicola str. Sg (Schizaphis graminum)]
gid=32043689[221-352] [Pseudomonas aeruginosa UCBPP-PA14]
gid=2498182[212-346] [N/A]
gid=12407614[212-346] [uncultured bacterium pCosAS1]
gid=12044303[228-331] [Mesorhizobium loti]
gid=15595697[221-352] [Pseudomonas aeruginosa PA01]
gid=28867724[221-352] [Pseudomonas syringae pv. tomato str. DC3000]
gid=33861649[224-335] [Prochlorococcus marinus subsp. pastoris str. CCMP1378]
gid=16121447[212-345] [Yersinia pestis]
gid=543889[213-346] [N/A]
gid=21229866[217-344] [Xanthomonas campestris pv. campestris str. ATCC 33913]
gid=2118377[231-332] [validated]
gid=33595796[228-335] [Bordetella parapertussis]
gid=26246745[212-346] [Escherichia coli CFT073]
gid=33863327[231-335] [Prochlorococcus marinus str. MIT 9313]
gid=34499836[229-327] [Chromobacterium violaceum ATCC 12472]
gid=12620127[212-346] [uncultured bacterium pCosHE2]
gid=24374281[218-350] [Shewanella oneidensis MR-1]
gid=23027840[219-350] [Microbulbifer degradans 2-40]
gid=24112143[212-346] [Shigella flexneri 2a str. 301]
gid=11596108[238-352] [Pichia jadinii]
gid=33152144[231-334] [Haemophilus ducreyi 35000HP]
gid=15794279[234-350] [Neisseria meningitidis Z2491]
gid=23135112[218-337] [Cytophaga hutchinsonii]
gid=26987104[221-352] [Pseudomonas putida KT2440]
gid=16272956[228-333] [Haemophilus influenzae Rd]
gid=23127772[217-335] [Nostoc punctiforme]
gid=28897887[215-350] [Vibrio parahaemolyticus RIMD 2210633]
gid=16127751[220-341] [Caulobacter crescentus CB15]
gid=16764157[212-346] [Salmonella typhimurium LT2]
gid=15641125[215-350] [Vibrio cholerae]
gid=15419053[215-329] [Acinetobacter calcoaceticus]
gid=33593682[233-340] [Bordetella pertussis]
gid=33240552[229-332] [Prochlorococcus marinus subsp. marinus str. CCMP1375]
gid=17229413[219-335] [Nostoc sp. PCC 7120]
gid=12620099[213-346] [uncultured bacterium pCosFS1]
gid=15602244[229-336] [Pasteurella multocida]
gid=15616902[211-343] [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
gid=17989120[240-346] [Brucella melitensis]
gid=15890971[227-339] [Agrobacterium tumefaciens]
gid=28197987[217-341] [Xylella fastidiosa Temecula1]
gid=33865467[220-325] [Synechococcus sp. WH 8102]		Cluster 2:
gid=18310526[226-319] [Clostridium perfringens]
gid=23053306[241-339] [Geobacter metallireducens]
gid=15606288[235-332] [Aquifex aeolicus]
gid=13366131[241-338] [Kurthia sp. 538-KA26]
gid=19551322[233-334] [Corynebacterium glutamicum ATCC 13032]
gid=15614311[228-333] [Bacillus halodurans]
gid=34541664[225-330] [Porphyromonas gingivalis W83]
gid=15608727[248-349] [Mycobacterium tuberculosis H37Rv]
gid=15925415[225-335] [Staphylococcus aureus subsp. aureus Mu50]
gid=21672893[240-333] [Chlorobium tepidum TLS]
gid=15827620[244-345] [Mycobacterium leprae]
gid=25010581[232-330] [Streptococcus agalactiae NEM316]
gid=28209922[231-325] [Clostridium tetani E88]
gid=27467152[219-313] [Staphylococcus epidermidis ATCC 12228]
gid=23474012[231-324] [Desulfovibrio desulfuricans G20]
gid=15893503[235-328] [Clostridium acetobutylicum]
gid=16080072[229-335] [Bacillus subtilis]
gid=25026645[233-334] [Corynebacterium efficiens YS-314]
gid=115001[228-332] [N/A]
gid=30022201[235-332] [Bacillus cereus ATCC 14579]
gid=30264192[235-332] [Bacillus anthracis str. Ames]
Cluster 3:
gid=15646016[182-282] [Helicobacter pylori 26695]
gid=15792988[181-278] [Campylobacter jejuni]
gid=32267230[186-283] [Helicobacter hepaticus ATCC 51449]
gid=34557837[182-279] [Wolinella succinogenes]
Short motifs reported by MEME(readme)
MEME motif diagram in this region
no motif infomation available
Motif alignments
no diagam information available