Geneva report for 2314367
General information
Genbank ID: 2314367
Gene name:HP1206
COGCOG1132
Current annotation:multidrug resistance protein (hetA)
BLOCKS information
BLOCKS hits:IPB001140:
BLOCKS diagram
PRINTS information
PRINTS hitsno prints match
Pfam information (readme)
PFAM hits:ABC_tran::ABC_membrane:
PFAM diagram
Variability information from nongapped BLAST
Variability profile(0-conserved,1-variable,red line - variable region)
Query anchored nongapped BLAST alignment (blue-aligned block, yellow-unaligned block with similar length,grey-unaligned gap-rich block readme)


Clustering on variable region (hierachical clustering,average percent identity between clusters < 30%)
On query region 1 to 364, total sequences extracted for clustering = 103
Cluster 1:
gid=15603166[1-363] [Pasteurella multocida]
gid=16272983[1-363] [Haemophilus influenzae Rd]
gid=23467604[1-364] [Haemophilus somnus 129PT]
gid=32028689[1-364] [Haemophilus somnus 2336]
gid=15676188[1-364] [Neisseria meningitidis MC58]
gid=15640229[1-362] [Vibrio cholerae]
gid=24374646[1-360] [Shewanella oneidensis MR-1]
gid=28901289[4-360] [Vibrio parahaemolyticus RIMD 2210633]		Cluster 2:
gid=28379046[1-347] [Lactobacillus plantarum WCFS1]
gid=15613276[1-337] [Bacillus halodurans]
gid=16801948[1-337] [Listeria innocua]
gid=30020094[1-293] [Bacillus cereus ATCC 14579]
gid=2274803[1-340] [Lactobacillus brevis]
gid=16804782[1-337] [Listeria monocytogenes EGD-e]
Cluster 3:
gid=16329858[1-349] [Synechocystis sp. PCC 6803]
gid=33240546[1-354] [Prochlorococcus marinus subsp. marinus str. CCMP1375]
gid=33861655[1-352] [Prochlorococcus marinus subsp. pastoris str. CCMP1378]
gid=33863351[1-357] [Prochlorococcus marinus str. MIT 9313]
gid=30248729[1-350] [Nitrosomonas europaea ATCC 19718]		Cluster 4:
gid=14861181[1-344] [Staphylococcus aureus]
Cluster 5:
gid=18311278[1-331] [Clostridium perfringens]
gid=15894891[1-338] [Clostridium acetobutylicum]
gid=28211454[1-347] [Clostridium tetani E88]
gid=16121992[1-333] [Yersinia pestis]
gid=29377161[1-333] [Enterococcus faecalis V583]
gid=21397643[1-333] [Bacillus anthracis A2012]
gid=22958997[1-413] [Rhodobacter sphaeroides]
gid=16080776[1-333] [Bacillus subtilis]		Cluster 6:
gid=21219227[1-366] [Streptomyces coelicolor A3(2)]
Cluster 7:
gid=21305105[1-468] [Actinobacillus cf. equuli]
gid=6531348[1-471] [Pasteurella aerogenes]
gid=1170305[1-468] [N/A]		Cluster 8:
gid=19553496[1-363] [Corynebacterium glutamicum ATCC 13032]
gid=25028753[1-363] [Corynebacterium efficiens YS-314]
Cluster 9:
gid=23103138[1-432] [Azotobacter vinelandii]		Cluster 10:
gid=33602079[1-359] [Bordetella bronchiseptica]
gid=33592061[13-376] [Bordetella pertussis]
gid=33596261[13-376] [Bordetella parapertussis]
gid=22968627[1-362] [Rhodospirillum rubrum]
gid=17987775[1-363] [Brucella melitensis]
gid=34497639[1-352] [Chromobacterium violaceum ATCC 12472]
gid=17545197[1-344] [Ralstonia solanacearum]
gid=23107909[1-361] [Novosphingobium aromaticivorans]
gid=15604078[12-355] [Rickettsia prowazekii]
gid=27378906[34-397] [Bradyrhizobium japonicum]
gid=22989221[1-396] [Burkholderia fungorum]
gid=23014801[1-373] [Magnetospirillum magnetotacticum]
Cluster 11:
gid=22961198[1-350] [Rhodopseudomonas palustris]
gid=15890388[1-346] [Agrobacterium tumefaciens]
gid=13474470[1-378] [Mesorhizobium loti]
gid=16519755[1-345] [Rhizobium sp. NGR234]
gid=15963913[1-352] [Sinorhizobium meliloti]		Cluster 12:
gid=15902150[1-387] [Streptococcus pneumoniae R6]
Cluster 13:
gid=17543740[1-390] [Caenorhabditis elegans]		Cluster 14:
gid=29348795[5-373] [Bacteroides thetaiotaomicron VPI-5482]
Cluster 15:
gid=21673056[1-367] [Chlorobium tepidum TLS]		Cluster 16:
gid=7522113[1-327] [N/A]
Cluster 17:
gid=22297758[1-355] [Thermosynechococcus elongatus BP-1]		Cluster 18:
gid=15642818[1-341] [Thermotoga maritima]
Cluster 19:
gid=28872098[14-377] [Pseudomonas syringae pv. tomato str. DC3000]
gid=23029345[1-348] [Microbulbifer degradans 2-40]
gid=23060737[1-354] [Pseudomonas fluorescens PfO-1]
gid=26991613[1-355] [Pseudomonas putida KT2440]		Cluster 20:
gid=32475881[1-433] [Pirellula sp.]
Cluster 21:
gid=23000866[1-351] [Magnetococcus sp. MC-1]		Cluster 22:
gid=21244469[1-345] [Xanthomonas axonopodis pv. citri str. 306]
Cluster 23:
gid=29832223[1-396] [Streptomyces avermitilis MA-4680]		Cluster 24:
gid=19075871[1-258] [Schizosaccharomyces pombe]
gid=3387977[1-258] [Homo sapiens]
Cluster 25:
gid=14520515[1-338] [Pyrococcus abyssi]
gid=14591493[1-342] [Pyrococcus horikoshii]		Cluster 26:
gid=3413446[1-348] [Campylobacter jejuni]
gid=34556507[1-349] [Wolinella succinogenes]
Cluster 27:
gid=34496085[1-337] [Chromobacterium violaceum ATCC 12472]		Cluster 28:
gid=15645820[1-364] [Helicobacter pylori 26695]
Cluster 29:
gid=33864963[1-354] [Synechococcus sp. WH 8102]		Cluster 30:
gid=33864195[1-381] [Prochlorococcus marinus str. MIT 9313]
gid=33864709[1-381] [Synechococcus sp. WH 8102]
Cluster 31:
gid=32266183[1-350] [Helicobacter hepaticus ATCC 51449]
gid=34556696[1-349] [Wolinella succinogenes]		Cluster 32:
gid=16125563[1-401] [Caulobacter crescentus CB15]
Cluster 33:
gid=191159[1-343] [N/A]
gid=191153[1-310] [N/A]		Cluster 34:
gid=33240781[1-366] [Prochlorococcus marinus subsp. marinus str. CCMP1375]
Cluster 35:
gid=34496280[1-356] [Chromobacterium violaceum ATCC 12472]		Cluster 36:
gid=33863091[1-339] [Prochlorococcus marinus str. MIT 9313]
gid=17228136[1-308] [Nostoc sp. PCC 7120]
gid=23127765[1-300] [Nostoc punctiforme]
gid=23041225[1-315] [Trichodesmium erythraeum IMS101]
gid=33240349[1-338] [Prochlorococcus marinus subsp. marinus str. CCMP1375]
Cluster 37:
gid=33239508[1-381] [Prochlorococcus marinus subsp. marinus str. CCMP1375]		Cluster 38:
gid=32491003[1-340] [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis]
Cluster 39:
gid=19703933[1-338] [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]		Cluster 40:
gid=22974777[1-365] [Chloroflexus aurantiacus]
Cluster 41:
gid=23136955[1-342] [Cytophaga hutchinsonii]		Cluster 42:
gid=20091758[1-351] [Methanosarcina acetivorans str. C2A]
Cluster 43:
gid=23473274[1-363] [Desulfovibrio desulfuricans G20]		Cluster 44:
gid=23121573[1-358] [Desulfitobacterium hafniense]
Cluster 45:
gid=33861795[1-385] [Prochlorococcus marinus subsp. pastoris str. CCMP1378]		Cluster 46:
gid=24216393[1-397] [Leptospira interrogans serovar lai str. 56601]
Cluster 47:
gid=31206493[1-384] [Anopheles gambiae]		Cluster 48:
gid=27366916[1-304] [Vibrio vulnificus CMCP6]
Cluster 49:
gid=29654161[1-351] [Coxiella burnetii RSA 493]
Short motifs reported by MEME(readme)
MEME motif diagram in this region
Motif alignments
Motif 1
 
Motif 2