Geneva report for
2314181
General information
Genbank ID:
2314181
Gene name:
HP1037
COG
COG0006
Current annotation:
conserved hypothetical protein
BLOCKS
information
BLOCKS hits
:
IPB001131
::
IPB002467
:
BLOCKS diagram
PRINTS
information
PRINTS hits
:
PR00599
:
PRINTS diagram
Pfam
information (
readme
)
PFAM hits
:
Peptidase_M24
:
PFAM diagram
Variability information from nongapped BLAST
Variability profile(0-conserved,1-variable,red line - variable region)
Query anchored nongapped BLAST alignment (blue-aligned block, yellow-unaligned block with similar length,grey-unaligned gap-rich block
readme
)
Clustering on variable region
(
hierachical clustering
,average percent identity between clusters < 30%)
On query region 1 to 171, total sequences extracted for clustering = 77
Cluster 1:
gid=15605303
[1-169] [Chlamydia trachomatis]
gid=15835477
[1-175] [Chlamydia muridarum]
gid=29840705
[1-169] [Chlamydophila caviae GPIC]
gid=15618722
[1-169] [Chlamydophila pneumoniae CWL029]
Cluster 2:
gid=15642817
[16-181] [Thermotoga maritima]
gid=20807729
[12-176] [Thermoanaerobacter tengcongensis]
gid=16079502
[10-169] [Bacillus subtilis]
gid=30022281
[11-169] [Bacillus cereus ATCC 14579]
gid=15902216
[12-175] [Streptococcus pneumoniae R6]
gid=16800459
[11-169] [Listeria innocua]
gid=1915907
[10-173] [Lactococcus lactis]
gid=15895365
[13-172] [Clostridium acetobutylicum]
gid=23099351
[11-169] [Oceanobacillus iheyensis HTE831]
gid=15615363
[11-169] [Bacillus halodurans]
gid=16803394
[11-169] [Listeria monocytogenes EGD-e]
gid=28211256
[17-175] [Clostridium tetani E88]
gid=21402250
[1-169] [Bacillus anthracis A2012]
Cluster 3:
gid=15836825
[32-202] [Xylella fastidiosa 9a5c]
gid=15599694
[34-204] [Pseudomonas aeruginosa PA01]
Cluster 4:
gid=113529
[31-201] [N/A]
gid=12831450
[36-206] [Agrobacterium tumefaciens]
Cluster 5:
gid=16272757
[30-200] [Haemophilus influenzae Rd]
gid=16766359
[44-214] [Salmonella typhimurium LT2]
Cluster 6:
gid=14600781
[1-208] [Aeropyrum pernix]
Cluster 7:
gid=29376292
[1-188] [Enterococcus faecalis V583]
gid=23024217
[1-183] [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]
gid=27468301
[1-178] [Staphylococcus epidermidis ATCC 12228]
gid=24379974
[1-181] [Streptococcus mutans UA159]
gid=23002364
[1-184] [Lactobacillus gasseri]
gid=33636445
[1-177] [Streptococcus bovis]
gid=5823364
[1-185] [Lactobacillus pentosus]
gid=22536870
[1-177] [Streptococcus agalactiae 2603V/R]
gid=8928267
[1-184] [N/A]
gid=21909897
[1-177] [Streptococcus pyogenes MGAS315]
gid=15924698
[1-179] [Staphylococcus aureus subsp. aureus Mu50]
gid=28378852
[1-185] [Lactobacillus plantarum WCFS1]
gid=23037837
[1-219] [Oenococcus oeni MCW]
gid=8928259
[1-184] [N/A]
Cluster 8:
gid=31544649
[1-181] [Mycoplasma gallisepticum R]
gid=13508209
[1-170] [Mycoplasma pneumoniae]
gid=12045182
[1-170] [Mycoplasma genitalium]
Cluster 9:
gid=23053979
[13-183] [Geobacter metallireducens]
gid=22971875
[1-207] [Chloroflexus aurantiacus]
gid=15827183
[1-178] [Mycobacterium leprae]
Cluster 10:
gid=29828703
[14-184] [Streptomyces avermitilis MA-4680]
gid=19552701
[15-185] [Corynebacterium glutamicum ATCC 13032]
gid=25028169
[20-190] [Corynebacterium efficiens YS-314]
gid=15609226
[6-176] [Mycobacterium tuberculosis H37Rv]
gid=21224406
[9-179] [Streptomyces coelicolor A3(2)]
Cluster 11:
gid=32475433
[1-215] [Pirellula sp.]
Cluster 12:
gid=18977715
[1-172] [Pyrococcus furiosus DSM 3638]
gid=15668992
[1-166] [Methanococcus jannaschii]
Cluster 13:
gid=15606678
[1-196] [Aquifex aeolicus]
Cluster 14:
gid=22976061
[52-222] [Ralstonia metallidurans]
Cluster 15:
gid=18311479
[1-184] [Clostridium perfringens]
Cluster 16:
gid=15828959
[1-165] [Mycoplasma pulmonis]
Cluster 17:
gid=14590819
[9-172] [Pyrococcus horikoshii]
gid=14521082
[1-179] [Pyrococcus abyssi]
Cluster 18:
gid=16082071
[1-174] [Thermoplasma acidophilum]
gid=13541389
[1-174] [Thermoplasma volcanium]
gid=22406927
[1-180] [Ferroplasma acidarmanus]
Cluster 19:
gid=34557960
[1-156] [Wolinella succinogenes]
gid=15645651
[1-171] [Helicobacter pylori 26695]
gid=32266443
[2-167] [Helicobacter hepaticus ATCC 51449]
Cluster 20:
gid=15789898
[1-184] [Halobacterium sp. NRC-1]
Cluster 21:
gid=23474208
[1-201] [Desulfovibrio desulfuricans G20]
Cluster 22:
gid=11499616
[1-240] [Archaeoglobus fulgidus DSM 4304]
Cluster 23:
gid=18312062
[1-163] [Pyrobaculum aerophilum]
Cluster 24:
gid=15806265
[1-178] [Deinococcus radiodurans]
Cluster 25:
gid=20093663
[1-165] [Methanopyrus kandleri AV19]
Cluster 26:
gid=16130317
[1-169] [Escherichia coli K12]
Cluster 27:
gid=15897298
[1-213] [Sulfolobus solfataricus]
Cluster 28:
gid=21674426
[1-191] [Chlorobium tepidum TLS]
Cluster 29:
gid=15678999
[1-172] [Methanothermobacter thermautotrophicus]
Cluster 30:
gid=15922656
[1-169] [Sulfolobus tokodaii]
Cluster 31:
gid=26553842
[1-178] [Mycoplasma penetrans]
gid=13358096
[1-187] [Ureaplasma urealyticum]
Short motifs reported by
MEME
(
readme
)
MEME motif diagram in this region
Motif alignments
Motif 1
Motif 2
Motif 3
Motif 4