Geneva report for 2313717
General information
Genbank ID: 2313717
Gene name:HP0600
COGCOG1132
Current annotation:multidrug resistance protein (spaB)
BLOCKS information
BLOCKS hits:IPB001140:
BLOCKS diagram
PRINTS information
PRINTS hitsno prints match
Pfam information (readme)
PFAM hits:ABC_tran::ABC_membrane:
PFAM diagram
Variability information from nongapped BLAST
Variability profile(0-conserved,1-variable,red line - variable region)
Query anchored nongapped BLAST alignment (blue-aligned block, yellow-unaligned block with similar length,grey-unaligned gap-rich block readme)


Clustering on variable region (hierachical clustering,average percent identity between clusters < 30%)
On query region 1 to 346, total sequences extracted for clustering = 110
Cluster 1:
gid=143559[1-333] [N/A]
gid=473013[1-347] [Lactococcus lactis]
gid=9757550[1-339] [Streptococcus pyogenes]		Cluster 2:
gid=15645225[1-346] [Helicobacter pylori 26695]
Cluster 3:
gid=30248729[1-351] [Nitrosomonas europaea ATCC 19718]
gid=33863351[1-353] [Prochlorococcus marinus str. MIT 9313]
gid=33861655[1-352] [Prochlorococcus marinus subsp. pastoris str. CCMP1378]
gid=33240546[1-351] [Prochlorococcus marinus subsp. marinus str. CCMP1375]		Cluster 4:
gid=29827408[1-400] [Streptomyces avermitilis MA-4680]
Cluster 5:
gid=22297696[1-361] [Thermosynechococcus elongatus BP-1]		Cluster 6:
gid=15604078[1-356] [Rickettsia prowazekii]
gid=22956961[1-366] [Rhodobacter sphaeroides]
gid=21357851[1-347] [Drosophila melanogaster]
gid=9187883[1-479] [Arabidopsis thaliana]
gid=23107909[1-360] [Novosphingobium aromaticivorans]
gid=23014801[1-372] [Magnetospirillum magnetotacticum]
gid=22963972[1-441] [Rhodopseudomonas palustris]
gid=22978890[1-370] [Ralstonia metallidurans]
gid=24372343[1-349] [Shewanella oneidensis MR-1]
Cluster 7:
gid=21230871[1-413] [Xanthomonas campestris pv. campestris str. ATCC 33913]
gid=21242211[1-401] [Xanthomonas axonopodis pv. citri str. 306]		Cluster 8:
gid=16799232[1-351] [Listeria innocua]
gid=7445810[1-351] [N/A]
gid=16802155[1-351] [Listeria monocytogenes EGD-e]
Cluster 9:
gid=23041078[1-353] [Trichodesmium erythraeum IMS101]		Cluster 10:
gid=11245962[1-458] [Streptococcus salivarius]
Cluster 11:
gid=15893949[9-354] [Clostridium acetobutylicum]		Cluster 12:
gid=23037689[1-396] [Oenococcus oeni MCW]
gid=19552189[1-403] [Corynebacterium glutamicum ATCC 13032]
gid=22992465[1-386] [Enterococcus faecium]
Cluster 13:
gid=18311278[1-332] [Clostridium perfringens]		Cluster 14:
gid=33864407[1-432] [Prochlorococcus marinus str. MIT 9313]
Cluster 15:
gid=23113832[1-367] [Desulfitobacterium hafniense]
gid=15643057[1-350] [Thermotoga maritima]
gid=30262443[1-360] [Bacillus anthracis str. Ames]
gid=30020503[1-360] [Bacillus cereus ATCC 14579]		Cluster 16:
gid=31216972[1-491] [Anopheles gambiae]
gid=27753995[1-453] [Mus musculus]
gid=21753735[1-437] [Homo sapiens]
Cluster 17:
gid=27365939[1-360] [Vibrio vulnificus CMCP6]		Cluster 18:
gid=12044865[1-352] [Mycoplasma genitalium]
Cluster 19:
gid=23126336[1-334] [Nostoc punctiforme]
gid=17232447[8-353] [Nostoc sp. PCC 7120]
gid=22972477[1-375] [Chloroflexus aurantiacus]
gid=23468634[5-350] [Pseudomonas syringae pv. syringae B728a]		Cluster 20:
gid=17543740[1-395] [Caenorhabditis elegans]
Cluster 21:
gid=21541357[1-485] [Lactobacillus salivarius subsp. salivarius]
gid=3849842[1-480] [Carnobacterium divergens]
gid=32187058[1-254] [Lactobacillus gasseri]
gid=1363368[1-480] [N/A]
gid=11066922[1-481] [Bacillus coagulans]
gid=28377326[1-482] [Lactobacillus plantarum WCFS1]		Cluster 22:
gid=14591493[1-343] [Pyrococcus horikoshii]
gid=18978027[1-334] [Pyrococcus furiosus DSM 3638]
gid=14520515[1-334] [Pyrococcus abyssi]
Cluster 23:
gid=34581310[1-353] [Rickettsia sibirica]		Cluster 24:
gid=1743404[1-474] [Salmo salar]
gid=5911326[1-320] [Heterodontus francisci]
Cluster 25:
gid=28210888[1-332] [Clostridium tetani E88]
gid=7388434[1-314] [N/A]
gid=15603339[1-314] [Pasteurella multocida]		Cluster 26:
gid=20091758[1-372] [Methanosarcina acetivorans str. C2A]
Cluster 27:
gid=19075871[1-259] [Schizosaccharomyces pombe]		Cluster 28:
gid=23098553[1-332] [Oceanobacillus iheyensis HTE831]
gid=23023914[1-362] [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]
gid=20807318[1-353] [Thermoanaerobacter tengcongensis]
Cluster 29:
gid=20161359[1-406] [Oryza sativa (japonica cultivar-group)]		Cluster 30:
gid=7522112[1-345] [N/A]
Cluster 31:
gid=33240349[1-438] [Prochlorococcus marinus subsp. marinus str. CCMP1375]		Cluster 32:
gid=6318176[1-491] [Bacillus sp. HIL-Y85/54728]
Cluster 33:
gid=21218918[1-368] [Streptomyces coelicolor A3(2)]		Cluster 34:
gid=126357[1-479] [N/A]
Cluster 35:
gid=25028483[1-343] [Corynebacterium efficiens YS-314]		Cluster 36:
gid=15901286[1-334] [Streptococcus pneumoniae TIGR4]
Cluster 37:
gid=23136955[1-337] [Cytophaga hutchinsonii]		Cluster 38:
gid=3413446[1-353] [Campylobacter jejuni]
gid=34556507[1-350] [Wolinella succinogenes]
Cluster 39:
gid=15892457[1-359] [Rickettsia conorii]		Cluster 40:
gid=17936124[1-365] [Agrobacterium tumefaciens str. C58 (U. Washington)]
Cluster 41:
gid=31544570[1-353] [Mycoplasma gallisepticum R]		Cluster 42:
gid=27885853[1-279] [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Cluster 43:
gid=28901289[1-361] [Vibrio parahaemolyticus RIMD 2210633]
gid=4104450[1-367] [Brucella melitensis biovar Abortus]
gid=23027204[1-361] [Microbulbifer degradans 2-40]
gid=34499525[1-355] [Chromobacterium violaceum ATCC 12472]
gid=13472425[1-363] [Mesorhizobium loti]
gid=15795092[1-363] [Neisseria meningitidis Z2491]
gid=23467604[1-359] [Haemophilus somnus 129PT]
gid=15965574[1-356] [Sinorhizobium meliloti]
gid=23059817[1-360] [Pseudomonas fluorescens PfO-1]
gid=32028689[1-359] [Haemophilus somnus 2336]
gid=15640229[1-358] [Vibrio cholerae]		Cluster 44:
gid=33152665[1-337] [Haemophilus ducreyi 35000HP]
Cluster 45:
gid=23021653[1-334] [Clostridium thermocellum ATCC 27405]		Cluster 46:
gid=21673056[1-382] [Chlorobium tepidum TLS]
Cluster 47:
gid=13357615[1-342] [Ureaplasma urealyticum]		Cluster 48:
gid=15807394[1-381] [Deinococcus radiodurans]
Cluster 49:
gid=15375024[1-361] [Encephalitozoon intestinalis]		Cluster 50:
gid=27356658[1-412] [Zymomonas mobilis]
Cluster 51:
gid=27377864[1-343] [Bradyrhizobium japonicum]		Cluster 52:
gid=23002311[1-353] [Lactobacillus gasseri]
Cluster 53:
gid=26553862[1-419] [Mycoplasma penetrans]		Cluster 54:
gid=25011442[1-346] [Streptococcus agalactiae NEM316]
Cluster 55:
gid=18124194[1-305] [Ginglymostoma cirratum]		Cluster 56:
gid=16330032[1-364] [Synechocystis sp. PCC 6803]
Cluster 57:
gid=24379356[1-349] [Streptococcus mutans UA159]		Cluster 58:
gid=34557628[1-335] [Wolinella succinogenes]
Cluster 59:
gid=32029318[1-381] [Haemophilus somnus 2336]		Cluster 60:
gid=15613689[1-355] [Bacillus halodurans]
Cluster 61:
gid=16121083[1-333] [Yersinia pestis]
Short motifs reported by MEME(readme)
MEME motif diagram in this region
Motif alignments
Motif 1
 
Motif 2
 
Motif 3