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Cell envelop/virulence genes
Cell motility/chemotaxis
Sensor proteins/histidine kinase
DNA/RNA processing
Hypothetical
Cell division
Carbohydrate active enzymes
Transcription regulator
House cleaning::protease,peptidase
P450 related
Others
 
 

Restriction/modification system (7/545)
GenBank IDCurrent annotation
9656287type I restriction enzyme HsdR, putative
9657029TrmA family RNA methyltransferase, putative
9658366TrmA family RNA methyltransferase, putative
9655252RNA methyltransferase, TrmH family
9654704ribosomal protein L11 methyltransferase
9656668adenine-specific methylase, putative
9657591site-specific DNA-methyltransferase, putative

Cell envelop/virulence::transporter genes(53/141/545)
GenBank IDCurrent annotation
9656280transporter, AcrB/D/F family
9656108multidrug transporter, putative
9656184sodium-dependent transporter, putative
9654401amino acid ABC transporter, periplasmic amino acid-binding portion
9658052transporter, AcrB/D/F family
9656846sodium-dependent transporter
9655168phosphate ABC transporter, permease protein
9654809Na+/H+ antiporter, putative
9658124phosphoglycerate transport regulatory protein PgtB, putative
9655453glutathione-regulated potassium-efflux system protein KefB, putative
9656188transporter, AcrB/D/F family
9656002ABC transporter, ATP-binding protein
9655496cation transport ATPase, E1-E2 family
9655051peptide ABC transporter, permease protein
9655936cation transport ATPase, E1-E2 family
9655657transport ATP-binding protein CydC
9658105iron(III) ABC transporter, ATP-binding protein
9655946toxin secretion transporter, putative
9655145spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein, putative
9657455phosphate ABC transporter, permease protein
9655042iron(III) ABC transporter, ATP-binding protein
9657405transporter, NadC family
9658123phosphoglycerate transport system transcriptional regulatory protein PgtA
9654691cadaverine/lysine antiporter CadB, putative
9655226ferric vibriobactin ABC transporter, permease protein
9657986heme transport protein HutA
9655948RTX toxin transporter
9658013ABC transporter, ATP-binding protein
9658246magnesium transporter MgtE, putative
9658438ABC transporter, ATP-binding protein
9656772cation transport ATPase, E1-E2 family
9657122thiamine ABC transporter, permease protein, putative
9654969sulfate ABC transporter, ATP-binding protein
9655947RTX toxin transporter
9655926spermidine/putrescine ABC transporter, ATP-binding protein
9658104iron(III) ABC transporter, permease protein
9655020ABC transporter, ATP-binding protein
9656058glycerol-3-phosphate ABC transporter, permease protein
9658380maltose ABC transporter, permease protein
9657623iron(III) ABC transporter, permease protein
9658144molybdenum ABC transporter, ATP-binding protein
9658383maltose/maltodextrin ABC transporter, ATP-binding protein
9656170magnesium transporter
9655658transport ATP-binding protein CydD
9654574peptide ABC transporter, periplasmic peptide-binding protein
9658482amino acid ABC transporter, periplasmic amino acid-binding protein
9656461C4-dicarboxylate transport sensor protein
9655041iron(III) ABC transporter, permease protein
9656059glycerol-3-phosphate ABC transporter, ATP-binding protein
9658125phosphoglycerate transport regulatory protein PgtC, putative
9658507putrescine-ornithine antiporter
9656624ferrous iron transport protein B
9657529C4-dicarboxylate transport sensor protein, putative

Cell envelop/virulence::membrane genes(7/141/545)
GenBank IDCurrent annotation
9655012lipoprotein, putative
9654902iron-regulated outer membrane virulence protein, TonB receptor family
9654395inner membrane protein, 60 kDa
9655407rare lipoprotein A, putative
9656877membrane-bound lytic murein transglycosylase A
9656796membrane-bound lytic murein transglycosylase D
9656135outer membrane protein, putative

Cell envelop/virulence::virulence related genes(81/141/545)
GenBank IDCurrent annotation
9654530GGDEF family protein
9655382polysaccharide biosynthesis protein, putative
9654901iron-regulated virulence regulatory protein IrgB
9655492GGDEF family protein
9657220fimbrial assembly protein
9657431GGDEF family protein
9657293GGDEF family protein
9657610GGDEF family protein
9655871GGDEF family protein
9655662GGDEF family protein
9655395exopolysaccharide biosynthesis protein, putative
9658394GGDEF family protein
9655867GGDEF family protein
9658487tagE protein
9655371multidrug resistance protein, putative
9656576sulfate permease family protein
9656110GGDEF family protein
9657310osmolarity sensor protein EnvZ
9655276toxin co-regulated pilus biosynthesis protein I
9657031GGDEF family protein
9655018sulfate permease family protein
9655034penicillin-binding protein 1B
9655392capsular polysaccharide biosynthesis glycosyltransferase, putative
9658278GGDEF family protein
9656103GGDEF family protein
9657490sulfate permease family protein
9658339permease
9655864GGDEF family protein
9655063multidrug resistance protein, putative
9655574GGDEF family protein
9655512fatty oxidation complex, alpha subunit
9655220vibriobactin-specific isochorismate synthase
9654468sensory box/GGDEF family protein
9655717sodium/dicarboxylate symporter
9654870organic solvent tolerance protein
9658376sensory box/GGDEF family protein
9658209GGDEF family protein
9656999type IV pilus assembly protein PilB
9656848GGDEF family protein
9657555GGDEF family protein
9657969GGDEF family protein
9657301sodium/solute symporter, putative
9657331general secretion pathway protein C
9658556long-chain-fatty-acid--CoA ligase, putative
9658084sodium/solute symporter
9658526secretion protein, HlyD family
9658053AcrA/AcrE family protein
9655295tagE protein
9657607multidrug resistance protein D
9658404GGDEF family protein
9657614hemolysin secretion protein HylB
9657960fatty acid cis/trans isomerase
9657447TonB system receptor, putative
9655907multidrug resistance protein VceB
9657965GGDEF family protein
9656471GGDEF family protein
9658423L-lactate permease, putative
9657349GGDEF family protein
9655449proton/peptide symporter family protein
9657461sulfate permease family protein
9656768ferric vibriobactin receptor
9654605hemolysin secretion ATP-binding protein, putative
9657468multidrug resistance protein D
9654465multidrug resistance protein, putative
9655219vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligase
9657226penicillin-binding protein 1A
9655593cyclopropane-fatty-acyl-phospholipid synthase
9656782GGDEF family protein
9655356GGDEF family protein
9657465GGDEF family protein
9658398GGDEF family protein
9657362multidrug resistance protein
9658530toxin secretion ATP-binding protein
9655286toxin co-regulated pilus biosynthesis protein T
9657330general secretion pathway protein E
9656940sensory box/GGDEF family protein
9654566multidrug resistance protein, putative
9657649antibiotic acetyltransferase
9658115sensory box/GGDEF family protein
9655696GGDEF family protein
9657664multidrug resistance protein D

Cell motility/chemotaxis(51/545)
GenBank IDCurrent annotation
9655786methyl-accepting chemotaxis protein
9655731methyl-accepting chemotaxis protein
9656753flagellar hook protein FlgE
9656742flagellin FlaC
9658413methyl-accepting chemotaxis protein
9655909methyl-accepting chemotaxis protein
9658515methyl-accepting chemotaxis protein
9656714methyl-accepting chemotaxis protein
9656507methyl-accepting chemotaxis protein
9657386methyl-accepting chemotaxis protein
9654941methyl-accepting chemotaxis protein
9658541chemotaxis protein CheA
9658074methyl-accepting chemotaxis protein
9657452methyl-accepting chemotaxis protein
9656696flagellin FlaE
9658429methyl-accepting chemotaxis protein
9658196methyl-accepting chemotaxis protein
9656431methyl-accepting chemotaxis protein
9656695flagellin FlaD
9657567methyl-accepting chemotaxis protein
9654939methyl-accepting chemotaxis protein
9656609chemotaxis protein CheA
9656388methyl-accepting chemotaxis protein
9656746flagellar hook-associated protein FlgM
9656156methyl-accepting chemotaxis protein
9658538methyl-accepting chemotaxis protein
9656745flagellar hook-associated protein FlgL
9658359methyl-accepting chemotaxis protein
9657665methyl-accepting chemotaxis protein
9657412methyl-accepting chemotaxis protein
9656673flagellar biosynthetic protein FliP
9654623methyl-accepting chemotaxis protein
9656694flagellin FlaB
9654874methyl-accepting chemotaxis protein
9658478methyl-accepting chemotaxis protein
9655890methyl-accepting chemotaxis protein
9656614flagellar biosynthetic protein FlhF, putative
9658080methyl-accepting chemotaxis protein
9658501methyl-accepting chemotaxis protein
9656750flagellar L-ring protein FlgH
9655901methyl-accepting chemotaxis protein
9655802methyl-accepting chemotaxis protein
9654496methyl-accepting chemotaxis protein
9655892chemotaxis protein CheA
9656398methyl-accepting chemotaxis protein
9657014methyl-accepting chemotaxis protein
9655776methyl-accepting chemotaxis protein
9658341methyl-accepting chemotaxis protein
9658296methyl-accepting chemotaxis protein
9656040methyl-accepting chemotaxis protein
9656743flagellin core protein A

Sensor proteins(29/545)
GenBank IDCurrent annotation
9655630sensor histidine kinase
9655556sensor histidine kinase
9656167sensory box sensor histidine kinase/response regulator VieS
9655056sensory box sensor histidine kinase/response regulator
9657030sensor histidine kinase/response regulator
9655553sensor histidine kinase
9658100sensor protein UhpB
9657633sensor histidine kinase
9656358sensor histidine kinase
9656939sensor histidine kinase FexB
9657288sensor protein CpxA
9655552sensory box sensor histidine kinase
9656116sensor kinase citA, putative
9656025sensor histidine kinase
9656151sensor histidine kinase
9655945sensor histidine kinase/response regulator
9654803sulfite reductase (NADPH) flavoprotein alpha-component
9655240sensor kinase citA
9655762sensor histidine kinase
9655735competence damage protein CinA, putative
9658157sensor histidine kinase LuxQ
9657928sensor histidine kinase/response regulator LuxN
9655809sensor histidine kinase
9655841sensory box sensor histidine kinase/response regulator
9658128sensor protein TorS
9657938sensor histidine kinase
9655804sensor histidine kinase
9657937pyruvate-flavoredoxin oxidoreductase
9657604sensory box sensor histidine kinase

tRNA synthetase (5/545)
GenBank IDCurrent annotation
9655081tRNA pseudouridine 55 synthase
9655500methionyl-tRNA synthetase
9656771glutamyl-tRNA synthetase
9654412glycyl-tRNA synthetase, beta chain
9656621arginyl-tRNA synthetase

DNA/RNA processing (32/545)
GenBank IDCurrent annotation
9656384ATP-dependent helicase, DinG family
9654761DNA mismatch repair protein MutL
9656851DNA-damage-inducible protein P
9656251DNA topoisomerase I
9658231exoribonuclease II
9658137helicase IV
9655520DNA polymerase III, subunits gamma and tau
9654528integrase/recombinase XerC
9657187ribonuclease R
9657150ATP-dependent RNA helicase DbpA
9655033ATP-dependent helicase HrpB
9655692DNA polymerase II
9654507DNA polymerase I
9657444ATP-dependent RNA helicase, DEAD box family
9657688site-specific recombinase IntI4
9654570ATP-dependent DNA helicase Rep
9657308ATP-dependent DNA helicase RecG
9655694excinuclease ABC, subunit C
9656559DNA polymerase III, delta prime subunit
9657926exonuclease SbcC, putative
9654403chromosomal DNA replication initiator DnaA
9654962DNA mismatch repair protein MutS
9656885exodeoxyribonuclease V, 67 kDa subunit
9656531ATP-dependent helicase, DinG family
9657005topoisomerase IV, subunit A
9656282helicase, putative
9657596ATP-dependent RNA helicase RhlE
9657112RNA polymerase sigma-54 factor
9656805DNA polymerase III, alpha subunit
9656886exodeoxyribonuclease V, 135 kDa subunit
9656575ribonuclease E
9656888exodeoxyribonuclease V, 125 kDa subunit

Protease/Nuclease (13/545)
GenBank IDCurrent annotation
9655201peptidase B
9655983ATP-dependent protease LA-related protein
9655996aminopeptidase N
9656619peptidase, insulinase family
9655617ATP-dependent Clp protease, ATP-binding subunit ClpA
9657083aminopeptidase A/I
9657446protease II
9657617protease
9657966gamma-glutamyltranspeptidase, putative
9656536protease IV
9655160protease, putative
9654558alkaline serine protease
9654996protease DO

Cell division (3/545)
GenBank IDCurrent annotation
9654548cell division protein FtsY
9655072cell division protein FtsH
9656437cell division protein FtsK, putative

Carbohydrate active enzymes(9/545)
GenBank IDCurrent annotation
9657706deoxyguanosinetriphosphate triphosphohydrolase-related protein
9655046beta-N-acetylhexosaminidase
9656775beta-N-acetylhexosaminidase
9655141soluble lytic murein transglycosylase
9656520deoxyguanosinetriphosphate triphosphohydrolase
9656495lytic murein transglycosylase, putative
9658291alpha-amylase
9656974UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
9654948beta-ketoadipate enol-lactone hydrolase, putative

IS elements(0/545)
GenBank IDCurrent annotation

Transcription regulation genes(39/545)
GenBank IDCurrent annotation
9657603response regulator, putative
9656866transcriptional activator, putative
9654464transcriptional regulator, LysR family
9658011repressor protein PhnR, putative
9656550transcriptional regulator, ROK family
9657949transcriptional regulator, LysR family
9654817transcriptional regulator, LuxR family
9657361transcriptional regulator, LysR family
9655555response regulator
9655102sigma-54 dependent transcriptional regulator
9657065transcriptional regulator, LysR family
9656418transcription-repair coupling factor
9656129transcriptional regulator, LysR family
9658464transcriptional regulator, LysR family
9658281response regulator
9658533response regulator
9654563transcriptional activator IlvY
9657924fructose repressor
9655365trehalose operon repressor
9656089transcriptional regulator, LysR family
9658390transcriptional regulator, LuxR family
9656026sigma-54 dependent response regulator
9656441cys regulon transcriptional activator
9655554response regulator
9655744transcriptional regulator, AraC/XylS family
9658070sucrose operon repressor ScrR, putative
9656342sigma-54 dependent transcriptional regulator
9654597transcriptional regulator, AraC/XylS family
9657573sigma-54 dependent transcriptional regulator
9655515response regulator
9655484LuxO repressor protein
9656485transcriptional regulator, LysR family
9657504sigma-54 dependent transcriptional regulator
9658520transcriptional regulator, AraC/XylS family
9655229transcriptional regulator, LysR family
9656688sigma-54 dependent transcriptional activator
9658444transcriptional regulator, AraC/XylS family
9655840response regulator
9655796transcriptional regulator TyrR

P450 related(0/545)
GenBank IDCurrent annotation

Hypothetical genes (71/545)
GenBank IDCurrent annotation
9654794conserved hypothetical protein
9658559conserved hypothetical protein
9654929conserved hypothetical protein
9658205conserved hypothetical protein
9654596conserved hypothetical protein
9658368conserved hypothetical protein
9657051conserved hypothetical protein
9655778conserved hypothetical protein
9658340conserved hypothetical protein
9656530conserved hypothetical protein
9654479conserved hypothetical protein
9655129conserved hypothetical protein
9655753conserved hypothetical protein
9655058conserved hypothetical protein
9655204conserved hypothetical protein
9658443conserved hypothetical protein
9657188conserved hypothetical protein
9655575conserved hypothetical protein
9658282conserved hypothetical protein
9656075conserved hypothetical protein
9656561conserved hypothetical protein
9657549conserved hypothetical protein
9657638conserved hypothetical protein
9657564conserved hypothetical protein
9658138conserved hypothetical protein
9655743conserved hypothetical protein
9658453conserved hypothetical protein
9656958conserved hypothetical protein
9658200conserved hypothetical protein
9655858conserved hypothetical protein
9656273conserved hypothetical protein
9655065conserved hypothetical protein
9654755conserved hypothetical protein
9657264conserved hypothetical protein
9658263hypothetical protein
9655542hypothetical protein
9657932conserved hypothetical protein
9655486conserved hypothetical protein
9655691conserved hypothetical protein
9658098conserved hypothetical protein
9657506hypothetical protein
9654712conserved hypothetical protein
9657796conserved hypothetical protein
9657078conserved hypothetical protein
9655547conserved hypothetical protein
9655783conserved hypothetical protein
9657606conserved hypothetical protein
9656140conserved hypothetical protein
9658160hypothetical protein
9656074conserved hypothetical protein
9657429conserved hypothetical protein
9657933conserved hypothetical protein
9654675conserved hypothetical protein
9657497hypothetical protein
9654842conserved hypothetical protein
9657988conserved hypothetical protein
9657487conserved hypothetical protein
9655057conserved hypothetical protein
9657534conserved hypothetical protein
9657464conserved hypothetical protein
9656415conserved hypothetical protein
9654535conserved hypothetical protein
9655035conserved hypothetical protein
9656907conserved hypothetical protein
9657131conserved hypothetical protein
9656229conserved hypothetical protein
9657090conserved hypothetical protein
9658427conserved hypothetical protein
9658185conserved hypothetical protein
9655851conserved hypothetical protein
9657992conserved hypothetical protein

Others (145/545)
GenBank IDCurrent annotation
9656088enterobactin synthetase component F-related protein
9657507IcmF-related protein
9656608protein-glutamate methylesterase CheB
9657397vgrG protein
9657279aspartokinase II/homoserine dehydrogenase, methionine-sensitive
9655650anthranilate synthase component I
9656976UDP-N-acetylmuramoylalanine--D-glutamate ligase
9655503asmA protein
9658344oxygen-independent coproporphyrinogen III oxidase, putative
9657510vgrG protein
9656588histone deacetylase/AcuC/AphA family protein
9655774periplasmic glucans biosynthesis protein MdoH
9655110phosphoenolpyruvate-protein phosphotransferase
9655613pseudouridine synthase family 1 protein
9656488biotin sulfoxide reductase
9657054ubiH protein
9655720cobalamin (5`-phosphate) synthase
9654746MutT/nudix family protein
9654975aspartokinase, alpha and beta subunits
9654811aspartokinase III, lysine-sensitive
9655166polyphosphate kinase
9657047l-aspartate oxidase
9655623glutamate decarboxylase, putative
9656802mesJ protein
9656246glycogen synthase
9655043phosphoglucomutase/phosphomannomutase, putative
9657028GTP pyrophosphokinase
96573934-alpha-glucanotransferase
9657899glutathione S-transferase, putative
9654557vitamin B12 receptor
9656913phosphoserine phosphatase
9657272primosomal protein N`
9655775periplasmic glucans biosynthesis protein MdoG
9654659iron-containing alcohol dehydrogenase family protein RfbM
9655801alanine racemase, putative
9657929aminotransferase, class II
9657544NADH dehydrogenase, putative
9656061glycerophosphoryl diester phosphodiesterase, putative
9656516menaquinone-specific isochorismate synthase
9654764GTP-binding protein HflX
9654606iron(III) compound receptor
9654457thiamin-phosphate pyrophosphorylase
9656279periplasmic linker protein, putative
9656078quinol oxidase, subunit II
9656876HesA/MoeB/ThiF family protein
9656323eha protein
9655452asparagine synthetase B, glutamine-hydrolyzing
9654582patatin-related protein
9656816phosphatidate cytidylyltransferase
9655163histidine protein kinase PhoR
9658426oxidoreductase/iron-sulfur cluster-binding protein
9655888deoxyribodipyrimidine photolyase, putative
9658127pyruvate kinase II
9658473glycogen operon protein GlgX
9654437sun protein
9655792para-aminobenzoate synthase, component I
9654692lysine decarboxylase, inducible
9658071sucrose-6-phosphate dehydrogenase
9656824protein-P-II uridylyltransferase
9655165exopolyphosphatase
9656276paraquat-inducible protein B
9656300N-acetylneuraminate lyase, putative
9658306cytochrome d ubiquinol oxidase, subunit II
9654669mannosyl-transferase
9655590oxidoreductase, short-chain dehydrogenase/reductase family
9658079CbbY family protein
9655566phosphate acetyltransferase
9656090NADH dehydrogenase, putative
9655025polyA polymerase
9655620iron-containing alcohol dehydrogenase
9656100acetolactate synthase
9655095c-di-GMP phosphodiesterase A-related protein
9654679mannose-6-phosphate isomerase
9655144c-di-GMP phosphodiesterase A-related protein
9657546NADH dehydrogenase, putative
9654858octaprenyl-diphosphate synthase
9657238phosphoenolpyruvate carboxylase
9658561ParB family protein
9656371cytochrome d ubiquinol oxidase, subunit II
9657154peptidyl-prolyl cis-trans isomerase, FKBP-type
9654981quinone oxidoreductase
9658554oxidoreductase, short-chain dehydrogenase/reductase family
9656339deoxyribodipyrimidine photolyase
9657894lipase, GDXG family
9655119MviN protein
9655292accessory colonization factor AcfB
9656658erythronate-4-phosphate dehydrogenase
9658120iron-containing alcohol dehydrogenase
9658403glycine cleavage operon activator, putative
9656023formate dehydrogenase accessory protein
9658252diaminobutyrate--pyruvate aminotransferase
96579525`-nucleotidase, putative
9657205succinylglutamate 5-semialdehyde dehydrogenase
9657144sulfate adenylate transferase, subunit 1
9656364tolA protein
9654658rfbL protein
9654819MSHA biogenesis protein MshH
9656736kinase, GHMP family
9654771peptidyl-prolyl cis-trans isomerase, FKBP-type
9655501mrp protein
9655606histidinol-phosphate aminotransferase
9655090c-di-GMP phosphodiesterase A-related protein
9654442smf protein
9658258acetyl-CoA synthase
96569902`,3`-cyclic-nucleotide 2`-phosphodiesterase, putative
9654880oxygen-independent coproporphyrinogen III oxidase, putative
9658126regulatory protein UhpC, putative
9656453peptidyl-prolyl cis-trans isomerse D
9658513aldehyde dehydrogenase
9655739ribonucleoside-diphosphate reductase, alpha subunit
9658319threonine 3-dehydrogenase
9654979oxaloacetate decarboxylase, alpha subunit
9654826MSHA biogenesis protein MshE
9656483FAD monooxygenase, PheA/TfdB family
9655828methylcitrate synthase
9658073aerobic glycerol-3-phosphate dehydrogenase
9655440oxidoreductase, short-chain dehydrogenase/reductase family
9655079initiation factor IF-2
9657503clpB protein
96572671,4-dihydroxy-2-naphthoate octaprenyltransferase
9658029molybdopterin biosynthesis MoeA protein
9654823MSHA biogenesis protein MshL
9656354mannose-6-phosphate isomerase
9657126UDP-N-acetylmuramate
9656005Sun/nucleolar protein family protein
9656582aspartate-semialdehyde dehydrogenase
9658106polyhydroxyalkanoic acid synthase
96565152-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase/2-oxoglutarate decarboxylase
9658204UDP-glucose 6-dehydrogenase
9656697tyrA protein
9654394thiophene and furan oxidation protein ThdF
9658168anaerobic glycerol-3-phosphate dehydrogenase, subunit A
9655464folylpolyglutamate synthase/dihydrofolate synthase
9655588heat shock protein HtpX
9656473phosphatidate cytidylyltransferase, putative
9656209trimethylamine-N-oxide reductase
9654482ubiquinone biosynthesis protein AarF, putative
9656410Rec2-related protein
9655661NifS-related protein
9654653perosamine synthase
9655375UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase
96581433-hydroxy-3-methylglutaryl CoA reductase
9658075protein F-related protein
9656978UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
9658096periplasmic nitrate reductase, cytochrome c-type protein